Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885420.1_cds_XP_016439403.1_34961
CDS Infomation

[gene=LOC107765290] [db_xref=GeneID:107765290] [protein=uncharacterized protein LOC107765290 isoform X4] [protein_id=XP_016439403.1] [location=join(58907..59182,60035..60133,65494..65621,65723..65876,66004..66113,66962..67045,67127..67175,67286..67377,68297..68429,68752..68831,68908..70322,70466..70579,70671..71350)] [gbkey=CDS]
Sequence

ATGGGAGGGAGGAGCATGACGAATTCGGATATCACAATCCGAACTGGTATTCATTCGGTA
TCCGACCCGAAACCCGTAACTAAATTCGATGTGCGGACCGAACCGGAACCGGCAATCAGC
AGCATAAGAAAACATCCAATCACACAAAAGCCGATCTCTCGCATTTTCTCTCTCTTGACA
AGCCTCTGTGTGGTTGTTCTCTCTGTCTTTTTCTCTCTACCTTCTTCGAGTCTCATCCTC
TCTACGATTTCCTCTTCTTCGATCTACTCATCACTTGAAACAATGAGCGAGCAGGGAGAT
AAGACATGTCCTCTATGTGCTGAGGAGATGGATTTGACAGATCAGCAGTTGAAGCCTTGC
AAGTGCGGATATGAGATATGTGTCTGGTGCTGGCATCACATTATGGATATGGCTGAGAAG
GATAATACAGATGGGCGGTGTCCAGCATGTCACACTCTTTATAACAAGGAAAAGATTGTT
GGCATGGCCACAAAATGTGATAAGGTAATGGCTGAGATGAGCGCTGAAAAAAGGTTGTCG
TCTCGCAAGGGAAAAAGTAAAACAGCAGATTCTAGGAAGCAACTCAGCAATGTGCGAGTC
GTTCAAAGAAATCTTGTTTATGTTATGGGGTTGCCTCTCAGTCTAGCTGATGAAGATCTT
CTACAGCGGAAAGAGTATTTTTCGAAGTATGGGAAGGTTCTGAAGGTGTCTATGTCTCGT
ACAGCTGCTGGTGCTATTCAACAATTTGCAAATAATACTTGTAGTGTATATATTACCTAT
TCAAAGGAGGAGGAAGCAATTCTGTGTATTCAGTCTGTACATGGGTTTGTTTTAGATGGT
AGACCTCTAAGAGCTTGCTTTGGAACCACAAAATACTGTCATGCTTGGTTGAGAAATATG
CCCTGTACCAATCCTGATTGTTTATACTTGCACGAGATTGGGTCACAAGAGGATAGCTTT
ACTAAAGACGAAGTCATATCTGCTTACACAAGAGTTCAACAAATTGCTGGGGCCATTAAT
AGTACGCAACAGCGATCAGGGAGTGCGTTACCACCCCCAGCAGAGGAGTACTACAGTCAC
AGCTCTGCTGCTTCAGGGAAACCTATTAGTAAAAATGCTGCTACTAATTCAGTACCCAGT
GTTAGAGGCTCACCACCAAATAGTAGCTCCGGTAGATCCGCTGCTCTTCCTGCTGGAGCT
TTATGGGGAACACGTGCATCAAATAATCAGCAGCCGGATGGGCCTCTTAATAAGAAGCCG
GAAACATGTAATCCAGCAGCGTTTTCTTCAGCTGTTGGAAGCACAAGTAAGGTTTCATTA
CTGCCTGCTTATGCAGGAAAAGTAGTTCATACTTTAGAAAATGGAACTACTCAAGAGAAA
GGGAAAATAGAGACTTTAGAACCTGTTAAGCAGTACGCAGGAGCAGATCCTCGAACCTAT
ACTTCTGAGAACCCCTCTCTTCTGGTACCTCCTACTTCGTCATCTATAAACACTCAGTTA
CATAGTGTTCCGTCATTAAAGGACAAACATAAACATATGATGCCAAACAGTGCCACAAAT
GCCTTTGATATTTCTGTAATGTCTAATGGACCTGGTTTTGCAAAAGAGTCTAATGATACC
ACAGATATTAAGATGCAGAATATATCCTCTGATATGTCGTCGTTGAGCATTGATAGACAT
AAAAAATCACAACGCAGCTGCATTGAGCAATGTAGGGAGTCCTTGCCATCTGAAATGACT
GGGGAATCTGCGGTTTCTGCGGATGAGATTTGTATCTCAAAAGAAAAGTCTGATTTGAGA
TTGGATGCATATAGTAAAGTTATACAAGTTGGTACTCCTGAAATGGAGGATGATTTGCTA
TCCTTTAATGAGCAGAGACATAGGGATCCCGAAGTAATTATCGAGAAAGTCTATTCGCCA
AATCTTTCCCTCTCTTTACACACTCCAGCTCAGCCTAGTGGTTATTCTCCTCAGCTGACT
AATGGTGGCGGACCTGTCAAGAGGGCCAATATGCAGTTAGACAGGAGAACTGATTCAGTA
TCTCAGCCTTCTACTATCGAATCATCGACTAATGGATACCTGAGCAATGTATCAAACTAT
GTGGCTGATCTGCGAACTATCAATGGAAGTTATTATCCGTTGCCTAATGAGGGTAAGAGG
ATGCACGTGGAAAGGTTTGAAGGTGAAGCTCCTAGCGAGATCTATAGTACTAATGTTGAT
AATGGAGAGAGCAGTATAATATCTAATATTTTGTCTCTGGATTTTGATCCTTGGAATGCG
TCATTAACTTCTCCTCAGAATCTTGTTAAGTTGTTGGGAGAAGCTGATAACCAACAAGGG
TCTCTTCGAGTGTCAAGCTCAAGAAAATTAACCAGTAACCAATCGAGGTTCTCTTTTGCA
AGAGAAGAAGAACCTGCCAGTCCATCAGCTGATTTTCAACCATCTCTAAGTTACATGGAG
CAAAATTTTAATCATTATGCTCATGCTCATGATTTTTCTAATAGCAGAAGTTATCAGCTT
GAGAATATGGGTTCTCGTAATGGTTTCTCTGTAGCTAATAATGAGGAATCCGTTGGTTCT
GGCAACTGCTTTTCTCATCTCTCTTCTAACAAGCTATCAGTGTCCAGACCTCAGATGTCA
GCGCCTCCAGGATTTTCAGCACCAAACAGAGCACCACCCCCGGGTTTTACTTCTCATTAT
GAGAGAATGGAACAGAATTTTGACTCTCTCTGTGGGAGTCACTTGCTTGATACCTCCTCG
TTGCACAATCAGTATCAGGCTCCCCCAGTTGGAAATGTGAGTAATGGGGACATTGAGTTT
ATGGATCCTGCAATTCTGGCAGTTGGTAAAGGGAGGATTCCTAATGGCCTTGATCTCTCA
AGCTTGGACATGTCTTCAGGTTTTTCTCCACAGTTAAGCACTTTAGAAAATGAGAGAAGG
CTTCAATTACTGATGCAAAGATCTCTAACTCCGCAACAGAACCAGAGGTTTGCTGATATG
GGGGACAATTTTTCTCCATACAGTGATGCATATGGAATTTCTTCCAGGGTTGTGGAGCAA
ACTCTGGCCAGCAATCAATTCCCATTTGATGGAATTTCTCCCAGGGTTATGGAGAAAACT
ATGCCCAGCAATCAATCGTCATTTGATGGAATTTCTTCCAGGGTTCTGGAGCAAACTCTG
TCCAACAATCAACCTCCATTTTCACAACTGAGTCCTCCCCAGACCAGGAACTCTGTCATG
TCAAATGGCCACTGGGATGGACGGAATGGGGTTCAGAGTGGAAACAATTTGGGTGCTGCG
GAAATCCTCCGAACCGAAAATTTGGGCTTTAACAAGTTCTTTACTGGATATGAGGAACCA
AAGTTCCATATGCCCAATTCTGGCAATTTGTATAAAAGAACATTTGGGATGTAA

Peptide Sequence

PEP ID

XP_016439403.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107765290 isoform X4 [Nicotiana tabacum]
Sequence

MGGRSMTNSDITIRTGIHSVSDPKPVTKFDVRTEPEPAISSIRKHPITQKPISRIFSLLT
SLCVVVLSVFFSLPSSSLILSTISSSSIYSSLETMSEQGDKTCPLCAEEMDLTDQQLKPC
KCGYEICVWCWHHIMDMAEKDNTDGRCPACHTLYNKEKIVGMATKCDKVMAEMSAEKRLS
SRKGKSKTADSRKQLSNVRVVQRNLVYVMGLPLSLADEDLLQRKEYFSKYGKVLKVSMSR
TAAGAIQQFANNTCSVYITYSKEEEAILCIQSVHGFVLDGRPLRACFGTTKYCHAWLRNM
PCTNPDCLYLHEIGSQEDSFTKDEVISAYTRVQQIAGAINSTQQRSGSALPPPAEEYYSH
SSAASGKPISKNAATNSVPSVRGSPPNSSSGRSAALPAGALWGTRASNNQQPDGPLNKKP
ETCNPAAFSSAVGSTSKVSLLPAYAGKVVHTLENGTTQEKGKIETLEPVKQYAGADPRTY
TSENPSLLVPPTSSSINTQLHSVPSLKDKHKHMMPNSATNAFDISVMSNGPGFAKESNDT
TDIKMQNISSDMSSLSIDRHKKSQRSCIEQCRESLPSEMTGESAVSADEICISKEKSDLR
LDAYSKVIQVGTPEMEDDLLSFNEQRHRDPEVIIEKVYSPNLSLSLHTPAQPSGYSPQLT
NGGGPVKRANMQLDRRTDSVSQPSTIESSTNGYLSNVSNYVADLRTINGSYYPLPNEGKR
MHVERFEGEAPSEIYSTNVDNGESSIISNILSLDFDPWNASLTSPQNLVKLLGEADNQQG
SLRVSSSRKLTSNQSRFSFAREEEPASPSADFQPSLSYMEQNFNHYAHAHDFSNSRSYQL
ENMGSRNGFSVANNEESVGSGNCFSHLSSNKLSVSRPQMSAPPGFSAPNRAPPPGFTSHY
ERMEQNFDSLCGSHLLDTSSLHNQYQAPPVGNVSNGDIEFMDPAILAVGKGRIPNGLDLS
SLDMSSGFSPQLSTLENERRLQLLMQRSLTPQQNQRFADMGDNFSPYSDAYGISSRVVEQ
TLASNQFPFDGISPRVMEKTMPSNQSSFDGISSRVLEQTLSNNQPPFSQLSPPQTRNSVM
SNGHWDGRNGVQSGNNLGAAEILRTENLGFNKFFTGYEEPKFHMPNSGNLYKRTFGM

Transcript Sequence

Gene sequence data has not been registered.